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Jennifer Lawrence Goes Dark

The New Yorker

She has been cast in maternal roles since her teens. Now, playing a mother for the first time since becoming one, she has chosen the part of a woman pushed past the edge of sanity. In "Die My Love," Lawrence, as Grace, vibrates with boredom and fury. The novel "Die, My Love," by the Argentinean writer Ariana Harwicz, is narrated by a wife and new mother who is living in rural France and seems to be losing her mind. Motherhood has inserted an immersion blender into her psyche: lust, repulsion, pleasure, and doom swirl into a single mess. She calls herself a "sodomising rodent" with "bullet-wounds for eyes," and thinks, "When I masturbate I desecrate crypts, and when I rock my baby I say amen, and when I smile I unplug an iron lung." One night, standing in the cold, staring at her family through a sliding door, she thinks, "I'll stop trying to draw blood from a stone. I'll contain my madness, I'll use the bathroom. I'll put my baby to sleep, jerk off my man and postpone my rebellion in favor of a better life." Martin Scorsese saw a brief review of the novel in the some years ago and decided to pick up a copy. He found it to be a "powerful mosaic of the mind," he told me recently. Scorsese is a member of a book club of sorts, with a few other filmmakers, who read with an eye toward adaptation. For "Die, My Love," he imagined casting Jennifer Lawrence in the lead. He'd been amazed by her performance in Darren Aronofsky's bewildering 2017 fantasia, "Mother!" In that surreal film--it's like an allegory set inside an oil painting--Lawrence plays a woman living with her poet husband in an old farmhouse, which is gradually, then apocalyptically, invaded by strangers. "She really is feeling everything that's happening, in what appears to be a dream of some kind," Scorsese said. He and Lawrence had discussed adaptations before. They considered "The Awakening," Kate Chopin's 1899 novel of female liberation, which ends with the protagonist, Edna Pontellier, walking into the sea. "Die, My Love" was like "The Awakening" if it began with Edna already underwater.


Rapid morphology characterization of two-dimensional TMDs and lateral heterostructures based on deep learning

arXiv.org Artificial Intelligence

Leveraging advancements in artificial intelligence, we introduce a deep learning-based method for efficiently characterizing heterostructures and 2D materials, specifically MoS 2-MoSe 2 lateral heterostructures and MoS 2 flakes with varying shapes and thicknesses. By utilizing YOLO models, we achieve an accuracy rate of over 94.67% in identifying these materials. Additionally, we explore the application of transfer learning across different materials, which further enhances model performance. This model exhibits robust generalization and anti-interference ability, ensuring reliable results in diverse scenarios. To facilitate practical use, we have developed an application that enables real-time analysis directly from optical microscope images, making the process significantly faster and more cost-effective than traditional methods. This deep learning-driven approach represents a promising tool for the rapid and accurate characterization of 2D materials, opening new avenues for research and development in material science. Keywords 2D material, TMDs, lateral heterostructure, deep learning, instance segmentation, morphology characterization Introduction Two-dimensional (2D) materials have attracted significant attention due to their excellent mechanical, electrical, thermal, and optical properties, making them ideal candidates for next-generation technologies.


Position: Stop Acting Like Language Model Agents Are Normal Agents

arXiv.org Artificial Intelligence

Language Model Agents (LMAs) are increasingly treated as capable of autonomously navigating interactions with humans and tools. Their design and deployment tends to presume they are normal agents capable of sustaining coherent goals, adapting across contexts and acting with a measure of intentionality. These assumptions are critical to prospective use cases in industrial, social and governmental settings. But LMAs are not normal agents. They inherit the structural problems of the large language models (LLMs) around which they are built: hallucinations, jailbreaking, misalignment and unpredictability. In this Position paper we argue LMAs should not be treated as normal agents, because doing so leads to problems that undermine their utility and trustworthiness. We enumerate pathologies of agency intrinsic to LMAs. Despite scaffolding such as external memory and tools, they remain ontologically stateless, stochastic, semantically sensitive, and linguistically intermediated. These pathologies destabilise the ontological properties of LMAs including identifiability, continuity, persistence and and consistency, problematising their claim to agency. In response, we argue LMA ontological properties should be measured before, during and after deployment so that the negative effects of pathologies can be mitigated.


LLM-TA: An LLM-Enhanced Thematic Analysis Pipeline for Transcripts from Parents of Children with Congenital Heart Disease

arXiv.org Artificial Intelligence

Thematic Analysis (TA) is a fundamental method in healthcare research for analyzing transcript data, but it is resource-intensive and difficult to scale for large, complex datasets. This study investigates the potential of large language models (LLMs) to augment the inductive TA process in high-stakes healthcare settings. Focusing on interview transcripts from parents of children with Anomalous Aortic Origin of a Coronary Artery (AAOCA), a rare congenital heart disease, we propose an LLM-Enhanced Thematic Analysis (LLM-TA) pipeline. Our pipeline integrates an affordable state-of-the-art LLM (GPT-4o mini), LangChain, and prompt engineering with chunking techniques to analyze nine detailed transcripts following the inductive TA framework. We evaluate the LLM-generated themes against human-generated results using thematic similarity metrics, LLM-assisted assessments, and expert reviews. Results demonstrate that our pipeline outperforms existing LLM-assisted TA methods significantly. While the pipeline alone has not yet reached human-level quality in inductive TA, it shows great potential to improve scalability, efficiency, and accuracy while reducing analyst workload when working collaboratively with domain experts. We provide practical recommendations for incorporating LLMs into high-stakes TA workflows and emphasize the importance of close collaboration with domain experts to address challenges related to real-world applicability and dataset complexity. https://github.com/jiaweixu98/LLM-TA


Mixed Effects Deep Learning for the interpretable analysis of single cell RNA sequencing data by quantifying and visualizing batch effects

arXiv.org Artificial Intelligence

Single-cell RNA sequencing (scRNA-seq) data are often confounded by technical or biological batch effects. Existing deep learning models mitigate these effects but often discard batch-specific information, potentially losing valuable biological insights. We propose a Mixed Effects Deep Learning (MEDL) autoencoder framework that separately models batch-invariant (fixed effects) and batch-specific (random effects) components. By decoupling batch-invariant biological states from batch variations, our framework integrates both into predictive models. Our approach also generates 2D visualizations of how the same cell appears across batches, enhancing interpretability. Retaining both fixed and random effect latent spaces improves classification accuracy. We applied our framework to three datasets spanning the cardiovascular system (Healthy Heart), Autism Spectrum Disorder (ASD), and Acute Myeloid Leukemia (AML). With 147 batches in the Healthy Heart dataset, far exceeding typical numbers, we tested our framework's ability to handle many batches. In the ASD dataset, our approach captured donor heterogeneity between autistic and healthy individuals. In the AML dataset, it distinguished donor heterogeneity despite missing cell types and diseased donors exhibiting both healthy and malignant cells. These results highlight our framework's ability to characterize fixed and random effects, enhance batch effect visualization, and improve prediction accuracy across diverse datasets.


Machine Learning for Asymptomatic Ratoon Stunting Disease Detection With Freely Available Satellite Based Multispectral Imaging

arXiv.org Artificial Intelligence

Disease detection in sugarcane, particularly the identification of asymptomatic infectious diseases such as Ratoon Stunting Disease (RSD), is critical for effective crop management. This study employed various machine learning techniques to detect the presence of RSD in different sugarcane varieties, using vegetation indices derived from freely available satellite-based spectral data. Our results show that the Support Vector Machine with a Radial Basis Function Kernel (SVM-RBF) was the most effective algorithm, achieving classification accuracy between 85.64% and 96.55%, depending on the variety. Gradient Boosting and Random Forest also demonstrated high performance achieving accuracy between 83.33% to 96.55%, while Logistic Regression and Quadratic Discriminant Analysis showed variable results across different varieties. The inclusion of sugarcane variety and vegetation indices was important in the detection of RSD. This agreed with what was identified in the current literature. Our study highlights the potential of satellite-based remote sensing as a cost-effective and efficient method for large-scale sugarcane disease detection alternative to traditional manual laboratory testing methods.


Toward Smart Scheduling in Tapis

arXiv.org Artificial Intelligence

The Tapis framework provides APIs for automating job execution on remote resources, including HPC clusters and servers running in the cloud. Tapis can simplify the interaction with remote cyberinfrastructure (CI), but the current services require users to specify the exact configuration of a job to run, including the system, queue, node count, and maximum run time, among other attributes. Moreover, the remote resources must be defined and configured in Tapis before a job can be submitted. In this paper, we present our efforts to develop an intelligent job scheduling capability in Tapis, where various attributes about a job configuration can be automatically determined for the user, and computational resources can be dynamically provisioned by Tapis for specific jobs. We develop an overall architecture for such a feature, which suggests a set of core challenges to be solved. Then, we focus on one such specific challenge: predicting queue times for a job on different HPC systems and queues, and we present two sets of results based on machine learning methods. Our first set of results cast the problem as a regression, which can be used to select the best system from a list of existing options. Our second set of results frames the problem as a classification, allowing us to compare the use of an existing system with a dynamically provisioned resource.


Analysis of the BraTS 2023 Intracranial Meningioma Segmentation Challenge

arXiv.org Artificial Intelligence

We describe the design and results from the BraTS 2023 Intracranial Meningioma Segmentation Challenge. The BraTS Meningioma Challenge differed from prior BraTS Glioma challenges in that it focused on meningiomas, which are typically benign extra-axial tumors with diverse radiologic and anatomical presentation and a propensity for multiplicity. Nine participating teams each developed deep-learning automated segmentation models using image data from the largest multi-institutional systematically expert annotated multilabel multi-sequence meningioma MRI dataset to date, which included 1000 training set cases, 141 validation set cases, and 283 hidden test set cases. Each case included T2, T2/FLAIR, T1, and T1Gd brain MRI sequences with associated tumor compartment labels delineating enhancing tumor, non-enhancing tumor, and surrounding non-enhancing T2/FLAIR hyperintensity. Participant automated segmentation models were evaluated and ranked based on a scoring system evaluating lesion-wise metrics including dice similarity coefficient (DSC) and 95% Hausdorff Distance. The top ranked team had a lesion-wise median dice similarity coefficient (DSC) of 0.976, 0.976, and 0.964 for enhancing tumor, tumor core, and whole tumor, respectively and a corresponding average DSC of 0.899, 0.904, and 0.871, respectively. These results serve as state-of-the-art benchmarks for future pre-operative meningioma automated segmentation algorithms. Additionally, we found that 1286 of 1424 cases (90.3%) had at least 1 compartment voxel abutting the edge of the skull-stripped image edge, which requires further investigation into optimal pre-processing face anonymization steps.


Sugarcane Health Monitoring With Satellite Spectroscopy and Machine Learning: A Review

arXiv.org Artificial Intelligence

Research into large-scale crop monitoring has flourished due to increased accessibility to satellite imagery. This review delves into previously unexplored and under-explored areas in sugarcane health monitoring and disease/pest detection using satellite-based spectroscopy and Machine Learning (ML). It discusses key considerations in system development, including relevant satellites, vegetation indices, ML methods, factors influencing sugarcane reflectance, optimal growth conditions, common diseases, and traditional detection methods. Many studies highlight how factors like crop age, soil type, viewing angle, water content, recent weather patterns, and sugarcane variety can impact spectral reflectance, affecting the accuracy of health assessments via spectroscopy. However, these variables have not been fully considered in the literature. In addition, the current literature lacks comprehensive comparisons between ML techniques and vegetation indices. We address these gaps in this review. We discuss that, while current findings suggest the potential for an ML-driven satellite spectroscopy system for monitoring sugarcane health, further research is essential. This paper offers a comprehensive analysis of previous research to aid in unlocking this potential and advancing the development of an effective sugarcane health monitoring system using satellite technology.


What's In My Big Data?

arXiv.org Artificial Intelligence

Large text corpora are the backbone of language models. However, we have a limited understanding of the content of these corpora, including general statistics, quality, social factors, and inclusion of evaluation data (contamination). In this work, we propose What's In My Big Data? (WIMBD), a platform and a set of sixteen analyses that allow us to reveal and compare the contents of large text corpora. WIMBD builds on two basic capabilities -- count and search -- at scale, which allows us to analyze more than 35 terabytes on a standard compute node. We apply WIMBD to ten different corpora used to train popular language models, including C4, The Pile, and RedPajama. Our analysis uncovers several surprising and previously undocumented findings about these corpora, including the high prevalence of duplicate, synthetic, and low-quality content, personally identifiable information, toxic language, and benchmark contamination. For instance, we find that about 50% of the documents in RedPajama and LAION-2B-en are duplicates. In addition, several datasets used for benchmarking models trained on such corpora are contaminated with respect to important benchmarks, including the Winograd Schema Challenge and parts of GLUE and SuperGLUE. We open-source WIMBD's code and artifacts to provide a standard set of evaluations for new text-based corpora and to encourage more analyses and transparency around them: github.com/allenai/wimbd.